Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 RNA5SP416-201ENST00000516838 111 ntBASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 AC005052.1-201ENST00000625181 2492 ntBASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 PKD1P5-201ENST00000532415 10291 ntBASIC15.13■□□□□ 0.01
CHRNA9Q9UGM1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 AC140113.2-201ENST00000604370 208 ntBASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 FAM197Y3-203ENST00000618346 717 ntBASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 AC046158.3-201ENST00000624947 2558 ntBASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA9Q9UGM1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 AL022342.1-201ENST00000400363 863 ntBASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 HMGA1P7-201ENST00000406908 502 ntBASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 KRT18P3-201ENST00000451602 1288 ntBASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 AC018845.2-201ENST00000568326 409 ntBASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 GGT3P-204ENST00000453783 1664 ntBASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 AC022188.1-201ENST00000620960 1664 ntBASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA9Q9UGM1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms