Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 GGT4P-201ENST00000623672 1708 ntBASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 SPDYE19P-201ENST00000338590 713 ntBASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 AC093004.1-201ENST00000508850 424 ntBASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 AC104794.3-201ENST00000566840 1248 ntBASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 MIR6069-201ENST00000620069 79 ntBASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 AC138969.3-201ENST00000546612 1459 ntBASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 AC138932.2-201ENST00000548268 1459 ntBASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 AC126755.4-201ENST00000549796 1459 ntBASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.81■□□□□ 0.6
HOXC10Q9NYD6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 AL359881.2-201ENST00000602973 570 ntBASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC10Q9NYD6 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 AC060834.1-201ENST00000443027 2032 ntBASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 AL008721.1-201ENST00000609964 604 ntBASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC10Q9NYD6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms