Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 AP002472.1-201ENST00000577490 586 ntBASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 AL009183.1-201ENST00000603760 355 ntBASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 AC018695.7-201ENST00000624587 2492 ntBASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 MIR770-201ENST00000390219 98 ntBASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 AL035633.1-201ENST00000406139 838 ntBASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 AL078644.1-201ENST00000609881 752 ntBASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 ALOX12P2-203ENST00000570921 1945 ntBASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CUEDC1Q9NWM3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CUEDC1Q9NWM3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms