Protein–RNA interactions for Protein: Q9NUM4

TMEM106B, Transmembrane protein 106B, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106BQ9NUM4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 TFAMP1-201ENST00000412727 736 ntBASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 ADH5P3-201ENST00000433842 1137 ntBASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 SPDYE11-202ENST00000450699 704 ntBASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 TIMM8BP1-201ENST00000452384 211 ntBASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 SPDYE9P-201ENST00000570642 692 ntBASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 SPDYE10P-202ENST00000612005 668 ntBASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 SPDYE8P-202ENST00000612377 668 ntBASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 AKAP8P1-201ENST00000434743 1349 ntBASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 AL671710.1-201ENST00000610245 2349 ntBASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 WASH6P-202ENST00000359512 1437 ntBASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 KRT8P39-201ENST00000396270 1433 ntBASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM106BQ9NUM4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 CNN2P11-201ENST00000429351 262 ntBASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 AP000344.2-201ENST00000512987 629 ntBASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 AL135744.1-201ENST00000565098 629 ntBASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 AL513210.1-201ENST00000629608 234 ntBASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 AC105339.1-204ENST00000636249 355 ntBASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM106BQ9NUM4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM106BQ9NUM4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
TMEM106BQ9NUM4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM106BQ9NUM4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM106BQ9NUM4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM106BQ9NUM4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM106BQ9NUM4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.02□□□□□ -0.16
TMEM106BQ9NUM4 SNX33P1-201ENST00000592116 1762 ntBASIC14.02□□□□□ -0.16
TMEM106BQ9NUM4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM106BQ9NUM4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms