Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.83■□□□□ 0.13
BRF2Q9HAW0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.83■□□□□ 0.13
BRF2Q9HAW0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
BRF2Q9HAW0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
BRF2Q9HAW0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.83■□□□□ 0.13
BRF2Q9HAW0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.83■□□□□ 0.13
BRF2Q9HAW0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.83■□□□□ 0.13
BRF2Q9HAW0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 AC009078.2-202ENST00000463353 338 ntBASIC15.83■□□□□ 0.12
BRF2Q9HAW0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 AC145285.3-201ENST00000564603 959 ntBASIC15.83■□□□□ 0.12
BRF2Q9HAW0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
BRF2Q9HAW0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 AC023141.13-201ENST00000604991 943 ntBASIC15.82■□□□□ 0.12
BRF2Q9HAW0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 AC005622.1-201ENST00000636801 1703 ntBASIC15.82■□□□□ 0.12
BRF2Q9HAW0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRF2Q9HAW0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms