Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 EGFEM1P-202ENST00000431685 1563 ntBASIC19.25■□□□□ 0.67
EFCC1Q9HA90 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 SLC25A6P5-201ENST00000435663 894 ntBASIC19.25■□□□□ 0.67
EFCC1Q9HA90 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 AC106886.1-201ENST00000568660 600 ntBASIC19.25■□□□□ 0.67
EFCC1Q9HA90 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 AC091167.2-201ENST00000579581 588 ntBASIC19.25■□□□□ 0.67
EFCC1Q9HA90 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
EFCC1Q9HA90 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 AL118508.1-201ENST00000613502 2345 ntBASIC19.24■□□□□ 0.67
EFCC1Q9HA90 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 AP3S2-216ENST00000617003 1561 ntBASIC19.24■□□□□ 0.67
EFCC1Q9HA90 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 MIR3909-201ENST00000579518 119 ntBASIC19.24■□□□□ 0.67
EFCC1Q9HA90 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 AC087499.5-201ENST00000452760 1342 ntBASIC19.24■□□□□ 0.67
EFCC1Q9HA90 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
EFCC1Q9HA90 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.23■□□□□ 0.67
EFCC1Q9HA90 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.23■□□□□ 0.67
EFCC1Q9HA90 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.23■□□□□ 0.67
EFCC1Q9HA90 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.23■□□□□ 0.67
EFCC1Q9HA90 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 AC068418.2-201ENST00000577309 3703 ntBASIC19.23■□□□□ 0.67
EFCC1Q9HA90 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCC1Q9HA90 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms