Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 IGLL3P-201ENST00000412472 434 ntBASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 AL031432.2-201ENST00000566714 459 ntBASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 AL928711.1-201ENST00000570165 459 ntBASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRC40Q9H9A6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRRC40Q9H9A6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
LRRC40Q9H9A6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRRC40Q9H9A6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRRC40Q9H9A6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRRC40Q9H9A6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRRC40Q9H9A6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
LRRC40Q9H9A6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 RNU1-129P-201ENST00000384064 167 ntBASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 HMGA1P7-201ENST00000406908 502 ntBASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 HCG4B-203ENST00000450128 991 ntBASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 MIR3909-201ENST00000579518 119 ntBASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 U1.21-201ENST00000580816 167 ntBASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 AC021097.1-201ENST00000607902 574 ntBASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 FER1L4-210ENST00000615531 5998 ntBASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 LINC02199-201ENST00000506655 2702 ntBASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRC40Q9H9A6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 AC079776.4-201ENST00000511039 504 ntBASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 AL031055.1-201ENST00000606362 631 ntBASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC40Q9H9A6 Z83851.2-201ENST00000609564 659 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms