Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AL645728.2-201ENST00000641974 660 ntBASIC15.37■□□□□ 0.05
UBQLN3Q9H347 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 AL513523.2-202ENST00000427283 2040 ntBASIC15.37■□□□□ 0.05
UBQLN3Q9H347 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 ALOX12P2-203ENST00000570921 1945 ntBASIC15.37■□□□□ 0.05
UBQLN3Q9H347 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 PCDHA1-201ENST00000378133 2726 ntBASIC15.37■□□□□ 0.05
UBQLN3Q9H347 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 AC008894.3-201ENST00000624324 3103 ntBASIC15.37■□□□□ 0.05
UBQLN3Q9H347 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 TOP3BP1-201ENST00000420768 1380 ntBASIC15.36■□□□□ 0.05
UBQLN3Q9H347 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 AC005829.1-201ENST00000570002 483 ntBASIC15.36■□□□□ 0.05
UBQLN3Q9H347 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.36■□□□□ 0.05
UBQLN3Q9H347 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBQLN3Q9H347 AL021920.2-201ENST00000624828 1351 ntBASIC15.36■□□□□ 0.05
UBQLN3Q9H347 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 AL353732.1-201ENST00000569618 1459 ntBASIC15.35■□□□□ 0.05
UBQLN3Q9H347 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 HTR5BP-201ENST00000430851 1154 ntBASIC15.35■□□□□ 0.05
UBQLN3Q9H347 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.35■□□□□ 0.05
UBQLN3Q9H347 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms