Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 AC093458.2-201ENST00000623150 629 ntBASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 AL592424.1-201ENST00000563624 1536 ntBASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 PI4KAP1-204ENST00000612579 1703 ntBASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.83■□□□□ 0.29
PHACTR1Q9C0D0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
PHACTR1Q9C0D0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
PHACTR1Q9C0D0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PHACTR1Q9C0D0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 AC129492.6-201ENST00000611383 1305 ntBASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 FER1L4-210ENST00000615531 5998 ntBASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.83■□□□□ 0.28
PHACTR1Q9C0D0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms