Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 HIST3H2BA-201ENST00000436555 524 ntBASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 AC026979.3-201ENST00000607315 403 ntBASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 SPDYE17-201ENST00000412399 783 ntBASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 AL512638.1-201ENST00000457493 794 ntBASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 AC025048.3-201ENST00000590609 569 ntBASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 AC004233.3-201ENST00000607794 1269 ntBASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 AC005702.4-201ENST00000618393 416 ntBASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CDK5RAP2Q96SN8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 AL391825.1-201ENST00000457671 1364 ntBASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 AC098850.1-201ENST00000419919 790 ntBASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 SRD5A3P1-201ENST00000603021 949 ntBASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CDK5RAP2Q96SN8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 SPDYE19P-201ENST00000338590 713 ntBASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 DGCR5-201ENST00000399539 862 ntBASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 RN7SL837P-201ENST00000463010 287 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms