Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AL590640.2-201ENST00000457038 527 ntBASIC4.91□□□□□ -1.62
HMCN1Q96RW7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 AC026410.3-201ENST00000514280 936 ntBASIC4.91□□□□□ -1.62
HMCN1Q96RW7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 SIGLEC29P-201ENST00000599873 1114 ntBASIC4.91□□□□□ -1.62
HMCN1Q96RW7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 EFTUD1P1-204ENST00000560401 1798 ntBASIC4.91□□□□□ -1.62
HMCN1Q96RW7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 GABARAPL3-202ENST00000624044 1851 ntBASIC4.91□□□□□ -1.62
HMCN1Q96RW7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 HPGD-203ENST00000422112 805 ntTSL 2 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 AC006335.1-201ENST00000445200 547 ntBASIC4.91□□□□□ -1.62
HMCN1Q96RW7 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 HOMER2P2-201ENST00000451621 847 ntBASIC4.91□□□□□ -1.62
HMCN1Q96RW7 AC104073.2-201ENST00000453737 312 ntBASIC4.91□□□□□ -1.62
HMCN1Q96RW7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 AL161938.1-201ENST00000569833 2180 ntBASIC4.91□□□□□ -1.62
HMCN1Q96RW7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 DKKL1P1-201ENST00000400550 698 ntBASIC4.91□□□□□ -1.62
HMCN1Q96RW7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 AL160314.3-201ENST00000556041 767 ntBASIC4.91□□□□□ -1.62
HMCN1Q96RW7 EMC4-208ENST00000559078 599 ntTSL 3 BASIC4.91□□□□□ -1.62
HMCN1Q96RW7 CYP2A7P1-201ENST00000595391 815 ntBASIC4.91□□□□□ -1.62
HMCN1Q96RW7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 AC242376.1-201ENST00000559033 726 ntBASIC4.9□□□□□ -1.62
HMCN1Q96RW7 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMCN1Q96RW7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms