Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALPK3Q96L96 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALPK3Q96L96 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALPK3Q96L96 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALPK3Q96L96 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ALPK3Q96L96 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ALPK3Q96L96 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALPK3Q96L96 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.7■□□□□ 0.42
ALPK3Q96L96 EEF1DP4-201ENST00000446006 880 ntBASIC17.7■□□□□ 0.42
ALPK3Q96L96 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.7■□□□□ 0.42
ALPK3Q96L96 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.7■□□□□ 0.42
ALPK3Q96L96 AC091271.1-201ENST00000611877 1162 ntBASIC17.7■□□□□ 0.42
ALPK3Q96L96 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.7■□□□□ 0.42
ALPK3Q96L96 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ALPK3Q96L96 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ALPK3Q96L96 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALPK3Q96L96 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ALPK3Q96L96 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ALPK3Q96L96 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ALPK3Q96L96 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALPK3Q96L96 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.69■□□□□ 0.42
ALPK3Q96L96 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 MIR33B-201ENST00000385104 96 ntBASIC17.69■□□□□ 0.42
ALPK3Q96L96 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 FAM86LP-201ENST00000478302 853 ntBASIC17.69■□□□□ 0.42
ALPK3Q96L96 TIMM17BP1-201ENST00000545713 516 ntBASIC17.69■□□□□ 0.42
ALPK3Q96L96 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.69■□□□□ 0.42
ALPK3Q96L96 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ALPK3Q96L96 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.69■□□□□ 0.42
ALPK3Q96L96 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.69■□□□□ 0.42
ALPK3Q96L96 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.69■□□□□ 0.42
ALPK3Q96L96 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.69■□□□□ 0.42
ALPK3Q96L96 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ALPK3Q96L96 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.69■□□□□ 0.42
ALPK3Q96L96 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.69■□□□□ 0.42
ALPK3Q96L96 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
ALPK3Q96L96 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.69■□□□□ 0.42
ALPK3Q96L96 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ALPK3Q96L96 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALPK3Q96L96 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 TUBB8P12-201ENST00000308911 1335 ntBASIC17.68■□□□□ 0.42
ALPK3Q96L96 TUBB7P-202ENST00000428444 1305 ntBASIC17.68■□□□□ 0.42
ALPK3Q96L96 TUBB8P7-204ENST00000567960 1332 ntBASIC17.68■□□□□ 0.42
ALPK3Q96L96 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 AC138028.6-201ENST00000616106 1482 ntBASIC17.68■□□□□ 0.42
ALPK3Q96L96 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 AC016396.2-201ENST00000562575 1417 ntBASIC17.68■□□□□ 0.42
ALPK3Q96L96 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.68■□□□□ 0.42
ALPK3Q96L96 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ALPK3Q96L96 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms