Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 SART3-203ENST00000546611 1184 ntBASIC17.56■□□□□ 0.4
CALR3Q96L12 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.56■□□□□ 0.4
CALR3Q96L12 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.56■□□□□ 0.4
CALR3Q96L12 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.56■□□□□ 0.4
CALR3Q96L12 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CALR3Q96L12 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CALR3Q96L12 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.56■□□□□ 0.4
CALR3Q96L12 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CALR3Q96L12 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.56■□□□□ 0.4
CALR3Q96L12 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.56■□□□□ 0.4
CALR3Q96L12 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALR3Q96L12 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALR3Q96L12 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALR3Q96L12 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CALR3Q96L12 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALR3Q96L12 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALR3Q96L12 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CALR3Q96L12 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.56■□□□□ 0.4
CALR3Q96L12 AC092384.3-202ENST00000564646 2873 ntBASIC17.56■□□□□ 0.4
CALR3Q96L12 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALR3Q96L12 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CALR3Q96L12 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALR3Q96L12 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CALR3Q96L12 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CALR3Q96L12 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CALR3Q96L12 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CALR3Q96L12 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CALR3Q96L12 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CALR3Q96L12 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.55■□□□□ 0.4
CALR3Q96L12 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CALR3Q96L12 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CALR3Q96L12 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CALR3Q96L12 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CALR3Q96L12 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.55■□□□□ 0.4
CALR3Q96L12 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CALR3Q96L12 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CALR3Q96L12 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CALR3Q96L12 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CALR3Q96L12 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.55■□□□□ 0.4
CALR3Q96L12 KRT18P31-201ENST00000506277 1292 ntBASIC17.55■□□□□ 0.4
CALR3Q96L12 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.55■□□□□ 0.4
CALR3Q96L12 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CALR3Q96L12 AC107918.2-201ENST00000530817 355 ntBASIC17.55■□□□□ 0.4
CALR3Q96L12 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CALR3Q96L12 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.55■□□□□ 0.4
CALR3Q96L12 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.55■□□□□ 0.4
CALR3Q96L12 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.55■□□□□ 0.4
CALR3Q96L12 MIR3652-201ENST00000579335 131 ntBASIC17.55■□□□□ 0.4
CALR3Q96L12 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.55■□□□□ 0.4
CALR3Q96L12 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.55■□□□□ 0.4
CALR3Q96L12 AL732292.2-201ENST00000609649 430 ntBASIC17.55■□□□□ 0.4
CALR3Q96L12 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CALR3Q96L12 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CALR3Q96L12 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CALR3Q96L12 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CALR3Q96L12 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CALR3Q96L12 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CALR3Q96L12 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CALR3Q96L12 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CALR3Q96L12 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CALR3Q96L12 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
CALR3Q96L12 AC023824.1-201ENST00000562945 2975 ntBASIC17.55■□□□□ 0.4
CALR3Q96L12 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.55■□□□□ 0.4
CALR3Q96L12 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.54■□□□□ 0.4
CALR3Q96L12 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.54■□□□□ 0.4
CALR3Q96L12 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.54■□□□□ 0.4
CALR3Q96L12 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
CALR3Q96L12 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.54■□□□□ 0.4
CALR3Q96L12 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.54■□□□□ 0.4
CALR3Q96L12 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CALR3Q96L12 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.54■□□□□ 0.4
CALR3Q96L12 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.54■□□□□ 0.4
CALR3Q96L12 REXO1L6P-202ENST00000619970 1078 ntBASIC17.54■□□□□ 0.4
CALR3Q96L12 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CALR3Q96L12 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CALR3Q96L12 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.54■□□□□ 0.4
CALR3Q96L12 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CALR3Q96L12 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CALR3Q96L12 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CALR3Q96L12 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CALR3Q96L12 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CALR3Q96L12 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms