Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRC46Q96FV0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.02□□□□□ -0.01
LRRC46Q96FV0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRC46Q96FV0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRC46Q96FV0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRC46Q96FV0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
LRRC46Q96FV0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRC46Q96FV0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.02□□□□□ -0.01
LRRC46Q96FV0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRC46Q96FV0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 AC138028.4-201ENST00000564984 1845 ntBASIC15.01□□□□□ -0.01
LRRC46Q96FV0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 SPDYE11-202ENST00000450699 704 ntBASIC15.01□□□□□ -0.01
LRRC46Q96FV0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 AC087163.2-201ENST00000457299 853 ntBASIC15.01□□□□□ -0.01
LRRC46Q96FV0 AC023141.5-201ENST00000458585 616 ntBASIC15.01□□□□□ -0.01
LRRC46Q96FV0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 SPDYE9P-201ENST00000570642 692 ntBASIC15.01□□□□□ -0.01
LRRC46Q96FV0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 SPDYE10P-202ENST00000612005 668 ntBASIC15.01□□□□□ -0.01
LRRC46Q96FV0 SPDYE8P-202ENST00000612377 668 ntBASIC15.01□□□□□ -0.01
LRRC46Q96FV0 AL161645.1-201ENST00000622716 1255 ntBASIC15.01□□□□□ -0.01
LRRC46Q96FV0 AC105339.1-204ENST00000636249 355 ntBASIC15.01□□□□□ -0.01
LRRC46Q96FV0 AC092902.6-201ENST00000641783 218 ntBASIC15.01□□□□□ -0.01
LRRC46Q96FV0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC46Q96FV0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRRC46Q96FV0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRRC46Q96FV0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15□□□□□ -0.01
LRRC46Q96FV0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15□□□□□ -0.01
LRRC46Q96FV0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
LRRC46Q96FV0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LRRC46Q96FV0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LRRC46Q96FV0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LRRC46Q96FV0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRRC46Q96FV0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRRC46Q96FV0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRRC46Q96FV0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15□□□□□ -0.01
LRRC46Q96FV0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LRRC46Q96FV0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15□□□□□ -0.01
LRRC46Q96FV0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15□□□□□ -0.01
LRRC46Q96FV0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15□□□□□ -0.01
LRRC46Q96FV0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRRC46Q96FV0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
LRRC46Q96FV0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
LRRC46Q96FV0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15□□□□□ -0.01
LRRC46Q96FV0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15□□□□□ -0.01
LRRC46Q96FV0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRRC46Q96FV0 AC026120.1-201ENST00000611536 926 ntBASIC15□□□□□ -0.01
LRRC46Q96FV0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LRRC46Q96FV0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LRRC46Q96FV0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15□□□□□ -0.01
LRRC46Q96FV0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15□□□□□ -0.01
LRRC46Q96FV0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms