Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 TNRC18P3-201ENST00000441896 2691 ntBASIC14.68□□□□□ -0.06
APH1AQ96BI3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 AC254562.1-201ENST00000417586 456 ntBASIC14.68□□□□□ -0.06
APH1AQ96BI3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 AP000344.2-201ENST00000512987 629 ntBASIC14.68□□□□□ -0.06
APH1AQ96BI3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 AC020765.3-201ENST00000613051 740 ntBASIC14.68□□□□□ -0.06
APH1AQ96BI3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APH1AQ96BI3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.68□□□□□ -0.06
APH1AQ96BI3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 HLA-A-202ENST00000376806 1854 ntBASIC14.67□□□□□ -0.06
APH1AQ96BI3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 AC004835.2-201ENST00000603762 682 ntBASIC14.67□□□□□ -0.06
APH1AQ96BI3 AL596442.2-201ENST00000610240 980 ntBASIC14.67□□□□□ -0.06
APH1AQ96BI3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 AC105339.1-204ENST00000636249 355 ntBASIC14.67□□□□□ -0.06
APH1AQ96BI3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
APH1AQ96BI3 AL031731.1-201ENST00000642131 2094 ntBASIC14.67□□□□□ -0.06
APH1AQ96BI3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms