Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 AC103702.1-201ENST00000548801 2630 ntBASIC14.9□□□□□ -0.02
CPNE4Q96A23 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE4Q96A23 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CPNE4Q96A23 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 AC078925.2-201ENST00000624013 1973 ntBASIC14.88□□□□□ -0.03
CPNE4Q96A23 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 AP006288.1-201ENST00000446065 395 ntBASIC14.88□□□□□ -0.03
CPNE4Q96A23 KRT18P34-201ENST00000488218 1270 ntBASIC14.88□□□□□ -0.03
CPNE4Q96A23 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 AC026120.1-201ENST00000611536 926 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms