Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS1Q92902 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.26■□□□□ 0.03
HPS1Q92902 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS1Q92902 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
HPS1Q92902 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HPS1Q92902 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HPS1Q92902 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.26■□□□□ 0.03
HPS1Q92902 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.26■□□□□ 0.03
HPS1Q92902 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS1Q92902 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.26■□□□□ 0.03
HPS1Q92902 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.26■□□□□ 0.03
HPS1Q92902 HLA-J-201ENST00000462773 1622 ntBASIC15.26■□□□□ 0.03
HPS1Q92902 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS1Q92902 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS1Q92902 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HPS1Q92902 KRT18P65-201ENST00000439811 1286 ntBASIC15.26■□□□□ 0.03
HPS1Q92902 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
HPS1Q92902 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.26■□□□□ 0.03
HPS1Q92902 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC15.26■□□□□ 0.03
HPS1Q92902 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.26■□□□□ 0.03
HPS1Q92902 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HPS1Q92902 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HPS1Q92902 AC004263.2-201ENST00000617183 678 ntBASIC15.26■□□□□ 0.03
HPS1Q92902 AC009154.2-201ENST00000621177 724 ntBASIC15.26■□□□□ 0.03
HPS1Q92902 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.26■□□□□ 0.03
HPS1Q92902 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.26■□□□□ 0.03
HPS1Q92902 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS1Q92902 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HPS1Q92902 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.26■□□□□ 0.03
HPS1Q92902 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS1Q92902 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS1Q92902 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HPS1Q92902 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HPS1Q92902 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
HPS1Q92902 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HPS1Q92902 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.26■□□□□ 0.03
HPS1Q92902 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HPS1Q92902 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.25■□□□□ 0.03
HPS1Q92902 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.25■□□□□ 0.03
HPS1Q92902 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
HPS1Q92902 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.25■□□□□ 0.03
HPS1Q92902 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.25■□□□□ 0.03
HPS1Q92902 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.25■□□□□ 0.03
HPS1Q92902 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.25■□□□□ 0.03
HPS1Q92902 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC15.25■□□□□ 0.03
HPS1Q92902 AL732292.2-201ENST00000609649 430 ntBASIC15.25■□□□□ 0.03
HPS1Q92902 AL592071.1-201ENST00000611956 408 ntBASIC15.25■□□□□ 0.03
HPS1Q92902 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.25■□□□□ 0.03
HPS1Q92902 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.25■□□□□ 0.03
HPS1Q92902 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.25■□□□□ 0.03
HPS1Q92902 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
HPS1Q92902 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HPS1Q92902 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.25■□□□□ 0.03
HPS1Q92902 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.25■□□□□ 0.03
HPS1Q92902 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS1Q92902 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.24■□□□□ 0.03
HPS1Q92902 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.24■□□□□ 0.03
HPS1Q92902 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.24■□□□□ 0.03
HPS1Q92902 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.24■□□□□ 0.03
HPS1Q92902 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
HPS1Q92902 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.24■□□□□ 0.03
HPS1Q92902 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.24■□□□□ 0.03
HPS1Q92902 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
HPS1Q92902 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
HPS1Q92902 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms