Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC3Q92529 AC074386.1-202ENST00000463561 864 ntBASIC17.64■□□□□ 0.41
SHC3Q92529 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SHC3Q92529 AP002472.1-201ENST00000577490 586 ntBASIC17.64■□□□□ 0.41
SHC3Q92529 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC3Q92529 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.64■□□□□ 0.41
SHC3Q92529 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.64■□□□□ 0.41
SHC3Q92529 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
SHC3Q92529 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.64■□□□□ 0.41
SHC3Q92529 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHC3Q92529 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
SHC3Q92529 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHC3Q92529 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.64■□□□□ 0.41
SHC3Q92529 AC016027.1-202ENST00000607927 1699 ntBASIC17.64■□□□□ 0.41
SHC3Q92529 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.64■□□□□ 0.41
SHC3Q92529 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC3Q92529 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHC3Q92529 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC3Q92529 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.64■□□□□ 0.41
SHC3Q92529 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC3Q92529 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC3Q92529 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC3Q92529 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHC3Q92529 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.63■□□□□ 0.41
SHC3Q92529 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC3Q92529 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.63■□□□□ 0.41
SHC3Q92529 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SHC3Q92529 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.63■□□□□ 0.41
SHC3Q92529 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC3Q92529 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC3Q92529 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHC3Q92529 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.63■□□□□ 0.41
SHC3Q92529 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.63■□□□□ 0.41
SHC3Q92529 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC3Q92529 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.63■□□□□ 0.41
SHC3Q92529 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.63■□□□□ 0.41
SHC3Q92529 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.63■□□□□ 0.41
SHC3Q92529 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.63■□□□□ 0.41
SHC3Q92529 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.63■□□□□ 0.41
SHC3Q92529 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.63■□□□□ 0.41
SHC3Q92529 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.63■□□□□ 0.41
SHC3Q92529 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.63■□□□□ 0.41
SHC3Q92529 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.63■□□□□ 0.41
SHC3Q92529 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SHC3Q92529 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC3Q92529 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHC3Q92529 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC3Q92529 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SHC3Q92529 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC3Q92529 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SHC3Q92529 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC3Q92529 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SHC3Q92529 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC3Q92529 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC3Q92529 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.62■□□□□ 0.41
SHC3Q92529 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
SHC3Q92529 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC3Q92529 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC3Q92529 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC3Q92529 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC3Q92529 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC3Q92529 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHC3Q92529 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHC3Q92529 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.62■□□□□ 0.41
SHC3Q92529 AC093724.1-201ENST00000448659 1027 ntBASIC17.62■□□□□ 0.41
SHC3Q92529 KRT18P34-201ENST00000488218 1270 ntBASIC17.62■□□□□ 0.41
SHC3Q92529 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHC3Q92529 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.62■□□□□ 0.41
SHC3Q92529 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.62■□□□□ 0.41
SHC3Q92529 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC3Q92529 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHC3Q92529 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SHC3Q92529 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.62■□□□□ 0.41
SHC3Q92529 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SHC3Q92529 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.62■□□□□ 0.41
SHC3Q92529 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.62■□□□□ 0.41
SHC3Q92529 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SHC3Q92529 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC3Q92529 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SHC3Q92529 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SHC3Q92529 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SHC3Q92529 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.61■□□□□ 0.41
SHC3Q92529 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHC3Q92529 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHC3Q92529 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHC3Q92529 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHC3Q92529 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHC3Q92529 LINC02199-201ENST00000506655 2702 ntBASIC17.61■□□□□ 0.41
SHC3Q92529 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHC3Q92529 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHC3Q92529 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
SHC3Q92529 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SHC3Q92529 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHC3Q92529 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHC3Q92529 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SHC3Q92529 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SHC3Q92529 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.61■□□□□ 0.41
SHC3Q92529 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
SHC3Q92529 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.61■□□□□ 0.41
SHC3Q92529 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms