Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 AC104794.3-201ENST00000566840 1248 ntBASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 AD000864.1-201ENST00000624076 2295 ntBASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 KRT17P8-201ENST00000540749 863 ntBASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 AL138918.1-201ENST00000568306 659 ntBASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 AC106886.1-201ENST00000568660 600 ntBASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2AF1L4Q8WU68 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.62
U2AF1L4Q8WU68 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
U2AF1L4Q8WU68 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
U2AF1L4Q8WU68 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 RNU1-129P-201ENST00000384064 167 ntBASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 RAB43P1-201ENST00000561790 589 ntBASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 U1.21-201ENST00000580816 167 ntBASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 AL031055.1-201ENST00000606362 631 ntBASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 AC016027.1-202ENST00000607927 1699 ntBASIC18.89■□□□□ 0.61
U2AF1L4Q8WU68 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
U2AF1L4Q8WU68 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms