Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CLDND2Q8NHS1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDND2Q8NHS1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDND2Q8NHS1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDND2Q8NHS1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDND2Q8NHS1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.13□□□□□ -0.15
CLDND2Q8NHS1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDND2Q8NHS1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.13□□□□□ -0.15
CLDND2Q8NHS1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 AL645939.2-201ENST00000427340 991 ntBASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 AC140658.5-201ENST00000438532 169 ntBASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 CYMP-203ENST00000474680 1263 ntBASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 AC022145.2-201ENST00000598203 171 ntBASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLDND2Q8NHS1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 AL355306.1-201ENST00000415580 579 ntBASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 EGFEM1P-202ENST00000431685 1563 ntBASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 ADH5P3-201ENST00000433842 1137 ntBASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 AC060834.1-201ENST00000443027 2032 ntBASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 TIMM8BP1-201ENST00000452384 211 ntBASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 AC005412.3-201ENST00000580309 715 ntBASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms