Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 REXO1L6P-201ENST00000603433 1515 ntBASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 NOC2LP2-201ENST00000407594 1944 ntBASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC9Q8NEP7 AL136982.4-201ENST00000437689 1740 ntBASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 CLK3P2-201ENST00000427566 1453 ntBASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 BOLA2P3-201ENST00000404566 256 ntBASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 BTNL10-201ENST00000595971 695 ntBASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 AL606495.2-201ENST00000605867 535 ntBASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 AL391069.4-201ENST00000609583 481 ntBASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 CYP4F24P-201ENST00000586049 1580 ntBASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
KLHDC9Q8NEP7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 USP32P1-208ENST00000506594 1164 ntBASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 AC010319.3-201ENST00000597028 470 ntBASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
KLHDC9Q8NEP7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
KLHDC9Q8NEP7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.02■□□□□ 0.47
KLHDC9Q8NEP7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
KLHDC9Q8NEP7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
KLHDC9Q8NEP7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms