Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 TNRC18P2-201ENST00000417666 2714 ntBASIC16.18■□□□□ 0.18
HIPK4Q8NE63 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 GPR89P-201ENST00000407924 1495 ntBASIC16.17■□□□□ 0.18
HIPK4Q8NE63 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 AC011840.4-201ENST00000578471 627 ntBASIC16.17■□□□□ 0.18
HIPK4Q8NE63 AC090616.6-201ENST00000582640 721 ntBASIC16.17■□□□□ 0.18
HIPK4Q8NE63 STK25P1-201ENST00000585406 838 ntBASIC16.17■□□□□ 0.18
HIPK4Q8NE63 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 AC005336.2-201ENST00000593183 939 ntBASIC16.17■□□□□ 0.18
HIPK4Q8NE63 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 AC013268.4-201ENST00000637413 2228 ntBASIC16.17■□□□□ 0.18
HIPK4Q8NE63 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIPK4Q8NE63 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 AC104076.2-201ENST00000448912 469 ntBASIC16.16■□□□□ 0.18
HIPK4Q8NE63 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 AC022616.7-201ENST00000525383 220 ntBASIC16.16■□□□□ 0.18
HIPK4Q8NE63 LINC01238-205ENST00000567549 1107 ntBASIC16.16■□□□□ 0.18
HIPK4Q8NE63 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 KRT8P10-201ENST00000450021 1447 ntBASIC16.16■□□□□ 0.18
HIPK4Q8NE63 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.16■□□□□ 0.18
HIPK4Q8NE63 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms