Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
FBXO39Q8N4B4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FBXO39Q8N4B4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.59■□□□□ 0.25
FBXO39Q8N4B4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
FBXO39Q8N4B4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FBXO39Q8N4B4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.59■□□□□ 0.25
FBXO39Q8N4B4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FBXO39Q8N4B4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FBXO39Q8N4B4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
FBXO39Q8N4B4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
FBXO39Q8N4B4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.58■□□□□ 0.25
FBXO39Q8N4B4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
FBXO39Q8N4B4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
FBXO39Q8N4B4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
FBXO39Q8N4B4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
FBXO39Q8N4B4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
FBXO39Q8N4B4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FBXO39Q8N4B4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
FBXO39Q8N4B4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
FBXO39Q8N4B4 AL662844.4-201ENST00000606367 2838 ntBASIC16.58■□□□□ 0.25
FBXO39Q8N4B4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 AC074386.1-202ENST00000463561 864 ntBASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 AL031432.2-201ENST00000566714 459 ntBASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 AL928711.1-201ENST00000570165 459 ntBASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.58■□□□□ 0.24
FBXO39Q8N4B4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 AC025580.3-201ENST00000617932 1424 ntBASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 FAM58CP-201ENST00000435741 640 ntBASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 RHOQP3-201ENST00000437982 621 ntBASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 ACTG1P14-201ENST00000446382 1122 ntBASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 HLA-J-202ENST00000469281 1241 ntBASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 MIR3197-201ENST00000582241 73 ntBASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 AC023141.13-201ENST00000604991 943 ntBASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 AC106028.4-201ENST00000614509 607 ntBASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FBXO39Q8N4B4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms