Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 HCG4-201ENST00000418983 998 ntBASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 AP002383.4-201ENST00000442518 975 ntBASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 KRT16P4-201ENST00000453883 522 ntBASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 DBP-204ENST00000599385 709 ntTSL 3 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 AL591684.3-201ENST00000605187 298 ntBASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 PGM5P2-202ENST00000637225 1043 ntBASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 DBET-201ENST00000630918 3363 ntBASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 RBM17P3-201ENST00000417687 1192 ntBASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 FAM86EP-206ENST00000510506 987 ntBASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 AC087641.1-201ENST00000557561 1021 ntBASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 AC104640.1-201ENST00000562617 2109 ntBASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC01561Q8N1V8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01561Q8N1V8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms