Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 AC233724.13-201ENST00000598383 410 ntBASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 RPL13P2-201ENST00000440687 659 ntBASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 AC036164.1-201ENST00000570544 333 ntBASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 AC133552.6-201ENST00000613406 534 ntBASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL27A1Q8IZC6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 AC005622.1-201ENST00000636801 1703 ntBASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 KRT8P37-201ENST00000451609 1420 ntBASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 CSF2RBP1-201ENST00000447905 391 ntBASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 FTH1P14-201ENST00000482930 551 ntBASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.28■□□□□ 0.04
COL27A1Q8IZC6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 MIR1908-201ENST00000410394 80 ntBASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms