Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CCDC144CPQ8IYA2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC144CPQ8IYA2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC144CPQ8IYA2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 AP002490.2-201ENST00000524791 560 ntBASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 MIR4515-201ENST00000584082 81 ntBASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 AC027612.4-201ENST00000605371 583 ntBASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
CCDC144CPQ8IYA2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 AC005052.1-201ENST00000625181 2492 ntBASIC19.57■□□□□ 0.72
CCDC144CPQ8IYA2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 ACTG1P14-201ENST00000446382 1122 ntBASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 LINC02084-201ENST00000606069 1096 ntBASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144CPQ8IYA2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC144CPQ8IYA2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC144CPQ8IYA2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC144CPQ8IYA2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC144CPQ8IYA2 ALOX12P2-203ENST00000570921 1945 ntBASIC19.55■□□□□ 0.72
CCDC144CPQ8IYA2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC144CPQ8IYA2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CCDC144CPQ8IYA2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC144CPQ8IYA2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC144CPQ8IYA2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC144CPQ8IYA2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC144CPQ8IYA2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms