Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 HILS1-202ENST00000545329 423 ntBASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 AC004461.2-201ENST00000629517 803 ntBASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 TPRX2P-201ENST00000535362 881 ntBASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 AC132938.2-201ENST00000579188 680 ntBASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 AL162274.1-201ENST00000617191 1098 ntBASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 AL591163.1-201ENST00000641757 987 ntBASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.59■□□□□ 0.41
NPAS4Q8IUM7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.58■□□□□ 0.41
NPAS4Q8IUM7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
NPAS4Q8IUM7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NPAS4Q8IUM7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NPAS4Q8IUM7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.58■□□□□ 0.41
NPAS4Q8IUM7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NPAS4Q8IUM7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NPAS4Q8IUM7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.58■□□□□ 0.41
NPAS4Q8IUM7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NPAS4Q8IUM7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
NPAS4Q8IUM7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
NPAS4Q8IUM7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NPAS4Q8IUM7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.58■□□□□ 0.41
NPAS4Q8IUM7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NPAS4Q8IUM7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 HLA-V-201ENST00000429037 534 ntBASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms