Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 GRK6P1-201ENST00000400595 1711 ntBASIC13.83□□□□□ -0.2
ZNF546Q86UE3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 LINC00895-201ENST00000629028 1637 ntBASIC13.82□□□□□ -0.2
ZNF546Q86UE3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 TSPY14P-201ENST00000303979 915 ntBASIC13.82□□□□□ -0.2
ZNF546Q86UE3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 EGLN1P1-201ENST00000531623 762 ntBASIC13.82□□□□□ -0.2
ZNF546Q86UE3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.82□□□□□ -0.2
ZNF546Q86UE3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF546Q86UE3 AC097637.2-201ENST00000624096 1997 ntBASIC13.82□□□□□ -0.2
ZNF546Q86UE3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 KRT89P-201ENST00000620027 1478 ntBASIC13.81□□□□□ -0.2
ZNF546Q86UE3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms