Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC11.34□□□□□ -0.59
CSMD3Q7Z407 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CSMD3Q7Z407 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CSMD3Q7Z407 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CSMD3Q7Z407 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CSMD3Q7Z407 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CSMD3Q7Z407 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC11.34□□□□□ -0.59
CSMD3Q7Z407 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CSMD3Q7Z407 GPAA1P2-201ENST00000417923 928 ntBASIC11.34□□□□□ -0.59
CSMD3Q7Z407 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CSMD3Q7Z407 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC11.34□□□□□ -0.59
CSMD3Q7Z407 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC11.34□□□□□ -0.59
CSMD3Q7Z407 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC11.34□□□□□ -0.59
CSMD3Q7Z407 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC11.34□□□□□ -0.59
CSMD3Q7Z407 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
CSMD3Q7Z407 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC11.34□□□□□ -0.59
CSMD3Q7Z407 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
CSMD3Q7Z407 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 AC006277.1-201ENST00000624348 1610 ntBASIC11.33□□□□□ -0.6
CSMD3Q7Z407 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 AC104457.1-201ENST00000401024 814 ntBASIC11.33□□□□□ -0.6
CSMD3Q7Z407 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 REEP1-202ENST00000453231 940 ntTSL 2 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 RPL13AP20-201ENST00000459725 609 ntBASIC11.33□□□□□ -0.6
CSMD3Q7Z407 SERBP1P3-201ENST00000459980 809 ntBASIC11.33□□□□□ -0.6
CSMD3Q7Z407 AC026740.1-201ENST00000607068 791 ntBASIC11.33□□□□□ -0.6
CSMD3Q7Z407 AL022328.1-201ENST00000610050 478 ntBASIC11.33□□□□□ -0.6
CSMD3Q7Z407 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 CALR4P-201ENST00000431943 946 ntBASIC11.33□□□□□ -0.6
CSMD3Q7Z407 AC093724.1-201ENST00000448659 1027 ntBASIC11.33□□□□□ -0.6
CSMD3Q7Z407 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
CSMD3Q7Z407 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 FTH1P14-201ENST00000482930 551 ntBASIC11.32□□□□□ -0.6
CSMD3Q7Z407 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.32□□□□□ -0.6
CSMD3Q7Z407 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms