Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.04■□□□□ 0.64
OTOP1Q7RTM1 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.04■□□□□ 0.64
OTOP1Q7RTM1 BNIP3P29-201ENST00000598302 571 ntBASIC19.04■□□□□ 0.64
OTOP1Q7RTM1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OTOP1Q7RTM1 AC011447.5-201ENST00000616168 564 ntBASIC19.04■□□□□ 0.64
OTOP1Q7RTM1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
OTOP1Q7RTM1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
OTOP1Q7RTM1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OTOP1Q7RTM1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
OTOP1Q7RTM1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.04■□□□□ 0.64
OTOP1Q7RTM1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OTOP1Q7RTM1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
OTOP1Q7RTM1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.03■□□□□ 0.64
OTOP1Q7RTM1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 BCL2-203ENST00000589955 5011 ntBASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 AL080243.2-201ENST00000418783 582 ntBASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 AC091167.2-201ENST00000579581 588 ntBASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 MPDU1-223ENST00000582151 728 ntBASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.02■□□□□ 0.64
OTOP1Q7RTM1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
OTOP1Q7RTM1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
OTOP1Q7RTM1 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.02■□□□□ 0.63
OTOP1Q7RTM1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.02■□□□□ 0.63
OTOP1Q7RTM1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
OTOP1Q7RTM1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.02■□□□□ 0.63
OTOP1Q7RTM1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
OTOP1Q7RTM1 AC012313.1-201ENST00000593393 3059 ntBASIC19.02■□□□□ 0.63
OTOP1Q7RTM1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
OTOP1Q7RTM1 PCDHB17P-201ENST00000539533 2393 ntBASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 TUBB8P12-201ENST00000308911 1335 ntBASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 TUBB7P-202ENST00000428444 1305 ntBASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 TUBB8P7-204ENST00000567960 1332 ntBASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
OTOP1Q7RTM1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms