Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM5Q71RC9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM5Q71RC9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.64■□□□□ 0.89
SMIM5Q71RC9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.64■□□□□ 0.89
SMIM5Q71RC9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM5Q71RC9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 AC099548.2-209ENST00000480264 625 ntBASIC20.63■□□□□ 0.89
SMIM5Q71RC9 TPI1-206ENST00000488464 791 ntTSL 5 BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 ZNF767P-206ENST00000513792 565 ntBASIC20.63■□□□□ 0.89
SMIM5Q71RC9 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 AC024267.1-201ENST00000582320 895 ntBASIC20.63■□□□□ 0.89
SMIM5Q71RC9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM5Q71RC9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 AL390961.4-201ENST00000623958 2535 ntBASIC20.62■□□□□ 0.89
SMIM5Q71RC9 TUBB8P12-201ENST00000308911 1335 ntBASIC20.62■□□□□ 0.89
SMIM5Q71RC9 TUBB7P-202ENST00000428444 1305 ntBASIC20.62■□□□□ 0.89
SMIM5Q71RC9 TUBB8P7-204ENST00000567960 1332 ntBASIC20.62■□□□□ 0.89
SMIM5Q71RC9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 RARRES2P5-201ENST00000564013 466 ntBASIC20.62■□□□□ 0.89
SMIM5Q71RC9 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 AC015936.2-201ENST00000593177 259 ntBASIC20.62■□□□□ 0.89
SMIM5Q71RC9 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 AC007613.1-201ENST00000572811 2597 ntBASIC20.62■□□□□ 0.89
SMIM5Q71RC9 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM5Q71RC9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 AC004945.1-201ENST00000416738 983 ntBASIC20.61■□□□□ 0.89
SMIM5Q71RC9 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 AC233724.13-201ENST00000598383 410 ntBASIC20.61■□□□□ 0.89
SMIM5Q71RC9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SMIM5Q71RC9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 AL391256.1-201ENST00000443260 1855 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms