Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 IL9RP2-201ENST00000423948 1312 ntBASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 HMGA1P7-201ENST00000406908 502 ntBASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 AC087641.1-201ENST00000557561 1021 ntBASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 PAUPAR-201ENST00000630360 2965 ntBASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 GGT4P-201ENST00000623672 1708 ntBASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NHLRC1Q6VVB1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 CRYGEP-201ENST00000412192 528 ntBASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 AC026396.1-201ENST00000419388 421 ntBASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 RPL13AP23-201ENST00000480739 586 ntBASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 AC096734.2-201ENST00000562054 433 ntBASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 BX640515.1-201ENST00000617215 977 ntBASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NHLRC1Q6VVB1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms