Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 FDX1P1-201ENST00000449115 551 ntBASIC15.13■□□□□ 0.01
NIPAL3Q6P499 PAWRP1-201ENST00000451083 565 ntBASIC15.13■□□□□ 0.01
NIPAL3Q6P499 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 AC008667.4-201ENST00000607370 168 ntBASIC15.13■□□□□ 0.01
NIPAL3Q6P499 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 AF228730.7-201ENST00000641842 219 ntBASIC15.13■□□□□ 0.01
NIPAL3Q6P499 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 AC006277.1-201ENST00000624348 1610 ntBASIC15.13■□□□□ 0.01
NIPAL3Q6P499 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.12■□□□□ 0.01
NIPAL3Q6P499 AC087163.2-201ENST00000457299 853 ntBASIC15.12■□□□□ 0.01
NIPAL3Q6P499 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.12■□□□□ 0.01
NIPAL3Q6P499 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NIPAL3Q6P499 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.11■□□□□ 0.01
NIPAL3Q6P499 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NIPAL3Q6P499 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NIPAL3Q6P499 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NIPAL3Q6P499 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.11■□□□□ 0.01
NIPAL3Q6P499 PAUPAR-201ENST00000630360 2965 ntBASIC15.11■□□□□ 0.01
NIPAL3Q6P499 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NIPAL3Q6P499 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NIPAL3Q6P499 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NIPAL3Q6P499 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NIPAL3Q6P499 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.11■□□□□ 0.01
NIPAL3Q6P499 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
NIPAL3Q6P499 IGHV3-65-201ENST00000523210 341 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms