Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RNF43Q68DV7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 LINC00554-201ENST00000564841 3011 ntBASIC17.39■□□□□ 0.37
RNF43Q68DV7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 ACTG1P14-201ENST00000446382 1122 ntBASIC17.39■□□□□ 0.37
RNF43Q68DV7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.39■□□□□ 0.37
RNF43Q68DV7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF43Q68DV7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RNF43Q68DV7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.39■□□□□ 0.37
RNF43Q68DV7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF43Q68DV7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF43Q68DV7 MIR4515-201ENST00000584082 81 ntBASIC17.39■□□□□ 0.37
RNF43Q68DV7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF43Q68DV7 AC093512.1-201ENST00000617969 520 ntBASIC17.39■□□□□ 0.37
RNF43Q68DV7 AC092902.6-201ENST00000641783 218 ntBASIC17.39■□□□□ 0.37
RNF43Q68DV7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RNF43Q68DV7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RNF43Q68DV7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF43Q68DV7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF43Q68DV7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF43Q68DV7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
RNF43Q68DV7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RNF43Q68DV7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF43Q68DV7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF43Q68DV7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF43Q68DV7 AC078925.2-201ENST00000624013 1973 ntBASIC17.39■□□□□ 0.37
RNF43Q68DV7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 ADH5P3-201ENST00000433842 1137 ntBASIC17.38■□□□□ 0.37
RNF43Q68DV7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 AL513480.1-201ENST00000451731 511 ntBASIC17.38■□□□□ 0.37
RNF43Q68DV7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 AL031432.2-201ENST00000566714 459 ntBASIC17.38■□□□□ 0.37
RNF43Q68DV7 AL928711.1-201ENST00000570165 459 ntBASIC17.38■□□□□ 0.37
RNF43Q68DV7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 AC091167.2-201ENST00000579581 588 ntBASIC17.38■□□□□ 0.37
RNF43Q68DV7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 AC091812.2-201ENST00000619081 385 ntBASIC17.38■□□□□ 0.37
RNF43Q68DV7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 RNF216P1-203ENST00000404404 2427 ntBASIC17.38■□□□□ 0.37
RNF43Q68DV7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF43Q68DV7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF43Q68DV7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF43Q68DV7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RNF43Q68DV7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF43Q68DV7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF43Q68DV7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF43Q68DV7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF43Q68DV7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF43Q68DV7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms