Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 AC134043.2-201ENST00000624206 2238 ntBASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 AL589987.1-201ENST00000453380 819 ntBASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 AL139010.1-201ENST00000454878 894 ntBASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD4Q5XG99 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 AL390961.4-201ENST00000623958 2535 ntBASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 TMEM14DP-201ENST00000422205 345 ntBASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 AC092658.1-201ENST00000505836 891 ntBASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 AP002490.2-201ENST00000524791 560 ntBASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 AC133552.6-201ENST00000613406 534 ntBASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 AL139011.1-202ENST00000642063 584 ntBASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 CROCCP2-202ENST00000412962 2773 ntBASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD4Q5XG99 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms