Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RC3H1Q5TC82 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RC3H1Q5TC82 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RC3H1Q5TC82 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RC3H1Q5TC82 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RC3H1Q5TC82 AL133338.1-201ENST00000565695 1517 ntBASIC20.57■□□□□ 0.88
RC3H1Q5TC82 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RC3H1Q5TC82 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.57■□□□□ 0.88
RC3H1Q5TC82 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RC3H1Q5TC82 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 MIR1908-201ENST00000410394 80 ntBASIC20.56■□□□□ 0.88
RC3H1Q5TC82 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RC3H1Q5TC82 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 KRT8P22-201ENST00000562317 1415 ntBASIC20.55■□□□□ 0.88
RC3H1Q5TC82 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 PDIA3P1-201ENST00000471856 1510 ntBASIC20.55■□□□□ 0.88
RC3H1Q5TC82 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 AL162726.2-201ENST00000438986 1017 ntBASIC20.55■□□□□ 0.88
RC3H1Q5TC82 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 AC084346.2-201ENST00000607097 949 ntBASIC20.55■□□□□ 0.88
RC3H1Q5TC82 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 U82695.1-201ENST00000635752 1889 ntBASIC20.55■□□□□ 0.88
RC3H1Q5TC82 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RC3H1Q5TC82 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 HNRNPA1P13-201ENST00000510646 963 ntBASIC20.54■□□□□ 0.88
RC3H1Q5TC82 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 TECR-220ENST00000600083 1204 ntTSL 2 BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 MIR6787-201ENST00000616675 61 ntBASIC20.54■□□□□ 0.88
RC3H1Q5TC82 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RC3H1Q5TC82 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RC3H1Q5TC82 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RC3H1Q5TC82 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.53■□□□□ 0.88
RC3H1Q5TC82 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RC3H1Q5TC82 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.53■□□□□ 0.88
RC3H1Q5TC82 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.53■□□□□ 0.88
RC3H1Q5TC82 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RC3H1Q5TC82 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.53■□□□□ 0.88
RC3H1Q5TC82 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RC3H1Q5TC82 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC20.53■□□□□ 0.88
RC3H1Q5TC82 RPL13P2-201ENST00000440687 659 ntBASIC20.53■□□□□ 0.88
RC3H1Q5TC82 KLF2P4-201ENST00000451959 1225 ntBASIC20.53■□□□□ 0.88
RC3H1Q5TC82 CTBP2P5-201ENST00000454986 1264 ntBASIC20.53■□□□□ 0.88
RC3H1Q5TC82 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.53■□□□□ 0.88
RC3H1Q5TC82 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms