Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL020989.1-201ENST00000422979 469 ntBASIC14.89□□□□□ -0.03
CCDC58Q4VC31 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 NUS1P1-201ENST00000446295 882 ntBASIC14.89□□□□□ -0.03
CCDC58Q4VC31 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 KRT8P26-201ENST00000534154 1276 ntBASIC14.89□□□□□ -0.03
CCDC58Q4VC31 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 AC011498.5-201ENST00000592027 486 ntBASIC14.89□□□□□ -0.03
CCDC58Q4VC31 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC58Q4VC31 NORAD-201ENST00000565493 5339 ntBASIC14.89□□□□□ -0.03
CCDC58Q4VC31 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.88□□□□□ -0.03
CCDC58Q4VC31 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 AC005521.1-201ENST00000393351 872 ntBASIC14.88□□□□□ -0.03
CCDC58Q4VC31 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 AC006011.2-201ENST00000621313 1158 ntBASIC14.88□□□□□ -0.03
CCDC58Q4VC31 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC58Q4VC31 AC079781.5-202ENST00000641784 3743 ntBASIC14.88□□□□□ -0.03
CCDC58Q4VC31 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 AL671277.2-201ENST00000458060 996 ntBASIC14.87□□□□□ -0.03
CCDC58Q4VC31 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms