Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.05□□□□□ -0.16
SSBP1Q04837 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SSBP1Q04837 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SSBP1Q04837 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.05□□□□□ -0.16
SSBP1Q04837 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.05□□□□□ -0.16
SSBP1Q04837 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.04□□□□□ -0.16
SSBP1Q04837 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.04□□□□□ -0.16
SSBP1Q04837 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.04□□□□□ -0.16
SSBP1Q04837 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.04□□□□□ -0.16
SSBP1Q04837 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SSBP1Q04837 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SSBP1Q04837 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SSBP1Q04837 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.04□□□□□ -0.16
SSBP1Q04837 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.04□□□□□ -0.16
SSBP1Q04837 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 LIN28AP1-201ENST00000429574 405 ntBASIC14.04□□□□□ -0.16
SSBP1Q04837 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.04□□□□□ -0.16
SSBP1Q04837 SNORA78-201ENST00000459373 127 ntBASIC14.04□□□□□ -0.16
SSBP1Q04837 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.04□□□□□ -0.16
SSBP1Q04837 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 VENTXP5-201ENST00000523979 775 ntBASIC14.04□□□□□ -0.16
SSBP1Q04837 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.04□□□□□ -0.16
SSBP1Q04837 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.04□□□□□ -0.16
SSBP1Q04837 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.04□□□□□ -0.16
SSBP1Q04837 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.04□□□□□ -0.16
SSBP1Q04837 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.04□□□□□ -0.16
SSBP1Q04837 AC020765.3-201ENST00000613051 740 ntBASIC14.04□□□□□ -0.16
SSBP1Q04837 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SSBP1Q04837 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.04□□□□□ -0.16
SSBP1Q04837 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
SSBP1Q04837 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SSBP1Q04837 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 AC148477.5-201ENST00000625164 1645 ntBASIC14.04□□□□□ -0.16
SSBP1Q04837 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.04□□□□□ -0.16
SSBP1Q04837 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SSBP1Q04837 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
SSBP1Q04837 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP1Q04837 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.03□□□□□ -0.16
SSBP1Q04837 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SSBP1Q04837 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.03□□□□□ -0.16
SSBP1Q04837 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SSBP1Q04837 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 TSPY20P-201ENST00000450910 630 ntBASIC14.03□□□□□ -0.16
SSBP1Q04837 VENTXP7-201ENST00000475503 772 ntBASIC14.03□□□□□ -0.16
SSBP1Q04837 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.03□□□□□ -0.16
SSBP1Q04837 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.03□□□□□ -0.16
SSBP1Q04837 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SSBP1Q04837 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SSBP1Q04837 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 SIGLEC16-201ENST00000599858 1437 ntBASIC14.03□□□□□ -0.16
SSBP1Q04837 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.03□□□□□ -0.16
SSBP1Q04837 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms