Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 LINC00982-205ENST00000420957 435 ntBASIC12.76□□□□□ -0.37
HIST1H1AQ02539 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 AC010331.1-201ENST00000611423 582 ntBASIC12.76□□□□□ -0.37
HIST1H1AQ02539 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1AQ02539 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 DBET-201ENST00000630918 3363 ntBASIC12.75□□□□□ -0.37
HIST1H1AQ02539 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 MIR1224-201ENST00000408193 85 ntBASIC12.75□□□□□ -0.37
HIST1H1AQ02539 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 KRT16P4-201ENST00000453883 522 ntBASIC12.75□□□□□ -0.37
HIST1H1AQ02539 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 BX005266.1-201ENST00000473402 457 ntBASIC12.75□□□□□ -0.37
HIST1H1AQ02539 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 FOSL1P1-201ENST00000511041 816 ntBASIC12.75□□□□□ -0.37
HIST1H1AQ02539 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms