Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 RNF216P1-203ENST00000404404 2427 ntBASIC17.42■□□□□ 0.38
USP46P62068 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.42■□□□□ 0.38
USP46P62068 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.42■□□□□ 0.38
USP46P62068 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
USP46P62068 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
USP46P62068 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.42■□□□□ 0.38
USP46P62068 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.42■□□□□ 0.38
USP46P62068 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.42■□□□□ 0.38
USP46P62068 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.42■□□□□ 0.38
USP46P62068 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.42■□□□□ 0.38
USP46P62068 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.42■□□□□ 0.38
USP46P62068 AC093512.1-201ENST00000617969 520 ntBASIC17.42■□□□□ 0.38
USP46P62068 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.42■□□□□ 0.38
USP46P62068 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.42■□□□□ 0.38
USP46P62068 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP46P62068 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.42■□□□□ 0.38
USP46P62068 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
USP46P62068 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.41■□□□□ 0.38
USP46P62068 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.41■□□□□ 0.38
USP46P62068 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.41■□□□□ 0.38
USP46P62068 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 SPDYE14P-201ENST00000442619 822 ntBASIC17.41■□□□□ 0.38
USP46P62068 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.41■□□□□ 0.38
USP46P62068 KRT18P34-201ENST00000488218 1270 ntBASIC17.41■□□□□ 0.38
USP46P62068 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.41■□□□□ 0.38
USP46P62068 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.41■□□□□ 0.38
USP46P62068 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 AC026150.2-201ENST00000564693 1156 ntBASIC17.41■□□□□ 0.38
USP46P62068 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.41■□□□□ 0.38
USP46P62068 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
USP46P62068 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.41■□□□□ 0.38
USP46P62068 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP46P62068 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP46P62068 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
USP46P62068 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP46P62068 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP46P62068 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP46P62068 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
USP46P62068 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms