Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.28■□□□□ 0.36
ERVFC1P60507 AL139011.1-202ENST00000642063 584 ntBASIC17.28■□□□□ 0.36
ERVFC1P60507 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERVFC1P60507 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ERVFC1P60507 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERVFC1P60507 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ERVFC1P60507 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERVFC1P60507 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERVFC1P60507 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ERVFC1P60507 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ERVFC1P60507 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.27■□□□□ 0.36
ERVFC1P60507 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ERVFC1P60507 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ERVFC1P60507 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERVFC1P60507 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ERVFC1P60507 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERVFC1P60507 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERVFC1P60507 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERVFC1P60507 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERVFC1P60507 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ERVFC1P60507 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ERVFC1P60507 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ERVFC1P60507 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ERVFC1P60507 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ERVFC1P60507 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.27■□□□□ 0.36
ERVFC1P60507 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ERVFC1P60507 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERVFC1P60507 AC119751.2-201ENST00000504529 210 ntBASIC17.27■□□□□ 0.36
ERVFC1P60507 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.27■□□□□ 0.36
ERVFC1P60507 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.27■□□□□ 0.36
ERVFC1P60507 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.27■□□□□ 0.36
ERVFC1P60507 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ERVFC1P60507 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ERVFC1P60507 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.27■□□□□ 0.36
ERVFC1P60507 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ERVFC1P60507 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.27■□□□□ 0.36
ERVFC1P60507 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ERVFC1P60507 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.27■□□□□ 0.35
ERVFC1P60507 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
ERVFC1P60507 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.27■□□□□ 0.35
ERVFC1P60507 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ERVFC1P60507 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
ERVFC1P60507 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.27■□□□□ 0.35
ERVFC1P60507 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
ERVFC1P60507 PP12613-201ENST00000424958 2230 ntBASIC17.27■□□□□ 0.35
ERVFC1P60507 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERVFC1P60507 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.26■□□□□ 0.35
ERVFC1P60507 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ERVFC1P60507 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ERVFC1P60507 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ERVFC1P60507 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERVFC1P60507 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERVFC1P60507 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.26■□□□□ 0.35
ERVFC1P60507 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERVFC1P60507 LTB4R2-202ENST00000528054 3092 ntBASIC17.26■□□□□ 0.35
ERVFC1P60507 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERVFC1P60507 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERVFC1P60507 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ERVFC1P60507 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.26■□□□□ 0.35
ERVFC1P60507 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ERVFC1P60507 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ERVFC1P60507 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.26■□□□□ 0.35
ERVFC1P60507 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ERVFC1P60507 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.26■□□□□ 0.35
ERVFC1P60507 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.26■□□□□ 0.35
ERVFC1P60507 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.26■□□□□ 0.35
ERVFC1P60507 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.26■□□□□ 0.35
ERVFC1P60507 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERVFC1P60507 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.26■□□□□ 0.35
ERVFC1P60507 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.26■□□□□ 0.35
ERVFC1P60507 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
ERVFC1P60507 AC093726.1-201ENST00000608064 963 ntBASIC17.26■□□□□ 0.35
ERVFC1P60507 WFDC1-204ENST00000613603 549 ntBASIC17.26■□□□□ 0.35
ERVFC1P60507 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
ERVFC1P60507 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERVFC1P60507 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.26■□□□□ 0.35
ERVFC1P60507 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
ERVFC1P60507 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERVFC1P60507 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERVFC1P60507 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.26■□□□□ 0.35
ERVFC1P60507 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERVFC1P60507 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ERVFC1P60507 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERVFC1P60507 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ERVFC1P60507 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERVFC1P60507 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.25■□□□□ 0.35
ERVFC1P60507 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERVFC1P60507 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERVFC1P60507 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERVFC1P60507 GPAA1P2-202ENST00000606848 1787 ntBASIC17.25■□□□□ 0.35
ERVFC1P60507 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.25■□□□□ 0.35
ERVFC1P60507 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ERVFC1P60507 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
ERVFC1P60507 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERVFC1P60507 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.25■□□□□ 0.35
ERVFC1P60507 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.25■□□□□ 0.35
ERVFC1P60507 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ERVFC1P60507 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERVFC1P60507 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ERVFC1P60507 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms