Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VSX2P58304 AKAP8P1-201ENST00000434743 1349 ntBASIC15.88■□□□□ 0.13
VSX2P58304 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.88■□□□□ 0.13
VSX2P58304 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VSX2P58304 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
VSX2P58304 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
VSX2P58304 CICP6-201ENST00000457191 2729 ntBASIC15.88■□□□□ 0.13
VSX2P58304 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.87■□□□□ 0.13
VSX2P58304 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.87■□□□□ 0.13
VSX2P58304 AC078925.2-201ENST00000624013 1973 ntBASIC15.87■□□□□ 0.13
VSX2P58304 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.87■□□□□ 0.13
VSX2P58304 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.87■□□□□ 0.13
VSX2P58304 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VSX2P58304 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.87■□□□□ 0.13
VSX2P58304 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VSX2P58304 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.87■□□□□ 0.13
VSX2P58304 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.87■□□□□ 0.13
VSX2P58304 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VSX2P58304 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VSX2P58304 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VSX2P58304 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VSX2P58304 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.87■□□□□ 0.13
VSX2P58304 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
VSX2P58304 AC004461.1-201ENST00000412461 403 ntBASIC15.87■□□□□ 0.13
VSX2P58304 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
VSX2P58304 RN7SL589P-201ENST00000481268 310 ntBASIC15.87■□□□□ 0.13
VSX2P58304 AP000344.2-201ENST00000512987 629 ntBASIC15.87■□□□□ 0.13
VSX2P58304 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.87■□□□□ 0.13
VSX2P58304 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.87■□□□□ 0.13
VSX2P58304 AC004835.2-201ENST00000603762 682 ntBASIC15.87■□□□□ 0.13
VSX2P58304 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
VSX2P58304 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
VSX2P58304 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.87■□□□□ 0.13
VSX2P58304 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VSX2P58304 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VSX2P58304 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VSX2P58304 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VSX2P58304 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VSX2P58304 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VSX2P58304 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
VSX2P58304 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.87■□□□□ 0.13
VSX2P58304 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VSX2P58304 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.87■□□□□ 0.13
VSX2P58304 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.87■□□□□ 0.13
VSX2P58304 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VSX2P58304 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VSX2P58304 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
VSX2P58304 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
VSX2P58304 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VSX2P58304 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.87■□□□□ 0.13
VSX2P58304 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VSX2P58304 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
VSX2P58304 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.86■□□□□ 0.13
VSX2P58304 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.86■□□□□ 0.13
VSX2P58304 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.86■□□□□ 0.13
VSX2P58304 AL512652.2-201ENST00000625156 1716 ntBASIC15.86■□□□□ 0.13
VSX2P58304 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
VSX2P58304 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.86■□□□□ 0.13
VSX2P58304 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.86■□□□□ 0.13
VSX2P58304 AC079140.1-201ENST00000508039 487 ntBASIC15.86■□□□□ 0.13
VSX2P58304 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.86■□□□□ 0.13
VSX2P58304 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VSX2P58304 AC243562.1-201ENST00000560672 389 ntBASIC15.86■□□□□ 0.13
VSX2P58304 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
VSX2P58304 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
VSX2P58304 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.86■□□□□ 0.13
VSX2P58304 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.86■□□□□ 0.13
VSX2P58304 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.86■□□□□ 0.13
VSX2P58304 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.86■□□□□ 0.13
VSX2P58304 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
VSX2P58304 NKILA-202ENST00000614771 2598 ntBASIC15.86■□□□□ 0.13
VSX2P58304 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VSX2P58304 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VSX2P58304 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
VSX2P58304 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VSX2P58304 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms