Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
RAB38P57729 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RAB38P57729 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB38P57729 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB38P57729 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB38P57729 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB38P57729 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB38P57729 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RAB38P57729 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB38P57729 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB38P57729 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB38P57729 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RAB38P57729 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RAB38P57729 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RAB38P57729 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB38P57729 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RAB38P57729 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB38P57729 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB38P57729 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB38P57729 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB38P57729 AC004967.1-201ENST00000453589 447 ntBASIC15.54■□□□□ 0.08
RAB38P57729 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB38P57729 AP000344.2-201ENST00000512987 629 ntBASIC15.54■□□□□ 0.08
RAB38P57729 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB38P57729 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB38P57729 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB38P57729 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB38P57729 AC027307.2-201ENST00000591252 911 ntBASIC15.54■□□□□ 0.08
RAB38P57729 AC022145.2-201ENST00000598203 171 ntBASIC15.54■□□□□ 0.08
RAB38P57729 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB38P57729 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.54■□□□□ 0.08
RAB38P57729 AC055717.3-201ENST00000622967 595 ntBASIC15.54■□□□□ 0.08
RAB38P57729 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RAB38P57729 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB38P57729 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RAB38P57729 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RAB38P57729 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB38P57729 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB38P57729 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB38P57729 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB38P57729 AC073439.1-201ENST00000624121 1774 ntBASIC15.54■□□□□ 0.08
RAB38P57729 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB38P57729 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RAB38P57729 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB38P57729 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB38P57729 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB38P57729 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB38P57729 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB38P57729 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB38P57729 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RAB38P57729 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RAB38P57729 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB38P57729 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RAB38P57729 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB38P57729 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB38P57729 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RAB38P57729 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB38P57729 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB38P57729 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RAB38P57729 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB38P57729 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB38P57729 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RAB38P57729 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB38P57729 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB38P57729 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB38P57729 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB38P57729 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
RAB38P57729 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.53■□□□□ 0.08
RAB38P57729 SPCS2P4-201ENST00000436160 681 ntBASIC15.53■□□□□ 0.08
RAB38P57729 AP006288.1-201ENST00000446065 395 ntBASIC15.53■□□□□ 0.08
RAB38P57729 AC093724.1-201ENST00000448659 1027 ntBASIC15.53■□□□□ 0.08
RAB38P57729 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB38P57729 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RAB38P57729 IGHV3-62-201ENST00000520057 340 ntBASIC15.53■□□□□ 0.08
RAB38P57729 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
RAB38P57729 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB38P57729 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB38P57729 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.53■□□□□ 0.08
RAB38P57729 AC073389.1-201ENST00000595595 795 ntBASIC15.53■□□□□ 0.08
RAB38P57729 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB38P57729 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.53■□□□□ 0.08
RAB38P57729 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB38P57729 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RAB38P57729 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB38P57729 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB38P57729 AL513210.1-201ENST00000629608 234 ntBASIC15.53■□□□□ 0.08
RAB38P57729 AC134684.3-201ENST00000641758 218 ntBASIC15.53■□□□□ 0.08
RAB38P57729 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RAB38P57729 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB38P57729 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB38P57729 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
RAB38P57729 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB38P57729 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB38P57729 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
RAB38P57729 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RAB38P57729 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB38P57729 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms