Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CDH13P55290 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH13P55290 AC010491.1-201ENST00000563101 2797 ntBASIC16.26■□□□□ 0.19
CDH13P55290 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH13P55290 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH13P55290 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.25■□□□□ 0.19
CDH13P55290 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH13P55290 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH13P55290 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH13P55290 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH13P55290 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH13P55290 AC024909.3-201ENST00000611513 2257 ntBASIC16.25■□□□□ 0.19
CDH13P55290 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CDH13P55290 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CDH13P55290 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH13P55290 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH13P55290 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH13P55290 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDH13P55290 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDH13P55290 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CDH13P55290 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH13P55290 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH13P55290 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH13P55290 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.25■□□□□ 0.19
CDH13P55290 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH13P55290 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
CDH13P55290 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDH13P55290 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.25■□□□□ 0.19
CDH13P55290 IFNL4P1-201ENST00000607083 540 ntBASIC16.25■□□□□ 0.19
CDH13P55290 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH13P55290 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH13P55290 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH13P55290 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH13P55290 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH13P55290 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH13P55290 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH13P55290 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDH13P55290 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH13P55290 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH13P55290 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH13P55290 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH13P55290 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH13P55290 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH13P55290 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH13P55290 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH13P55290 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH13P55290 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH13P55290 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH13P55290 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH13P55290 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH13P55290 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH13P55290 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH13P55290 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH13P55290 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH13P55290 TSPY26P-202ENST00000565928 3884 ntBASIC16.24■□□□□ 0.19
CDH13P55290 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH13P55290 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CDH13P55290 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH13P55290 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CDH13P55290 AC073621.1-201ENST00000392730 636 ntBASIC16.24■□□□□ 0.19
CDH13P55290 KRT18P27-201ENST00000427733 1299 ntBASIC16.24■□□□□ 0.19
CDH13P55290 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH13P55290 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.24■□□□□ 0.19
CDH13P55290 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH13P55290 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.24■□□□□ 0.19
CDH13P55290 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH13P55290 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.24■□□□□ 0.19
CDH13P55290 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH13P55290 CLEC4GP1-201ENST00000596555 870 ntBASIC16.24■□□□□ 0.19
CDH13P55290 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH13P55290 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDH13P55290 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH13P55290 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
CDH13P55290 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH13P55290 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH13P55290 AC006449.6-201ENST00000612330 2296 ntBASIC16.24■□□□□ 0.19
CDH13P55290 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CDH13P55290 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CDH13P55290 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH13P55290 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH13P55290 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH13P55290 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CDH13P55290 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH13P55290 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CDH13P55290 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 GPAA1P2-202ENST00000606848 1787 ntBASIC16.23■□□□□ 0.19
CDH13P55290 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CDH13P55290 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 AL353732.1-201ENST00000569618 1459 ntBASIC16.23■□□□□ 0.19
CDH13P55290 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 PCGF3-213ENST00000620529 1899 ntBASIC16.23■□□□□ 0.19
CDH13P55290 LINC00554-201ENST00000564841 3011 ntBASIC16.23■□□□□ 0.19
CDH13P55290 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.23■□□□□ 0.19
CDH13P55290 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms