Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 HMGA1P7-201ENST00000406908 502 ntBASIC18.63■□□□□ 0.57
EPHB4P54760 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EPHB4P54760 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.63■□□□□ 0.57
EPHB4P54760 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.63■□□□□ 0.57
EPHB4P54760 MIR4515-201ENST00000584082 81 ntBASIC18.63■□□□□ 0.57
EPHB4P54760 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHB4P54760 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.63■□□□□ 0.57
EPHB4P54760 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.63■□□□□ 0.57
EPHB4P54760 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.63■□□□□ 0.57
EPHB4P54760 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHB4P54760 PCDHA14-201ENST00000506751 2298 ntBASIC18.63■□□□□ 0.57
EPHB4P54760 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
EPHB4P54760 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
EPHB4P54760 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EPHB4P54760 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHB4P54760 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
EPHB4P54760 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHB4P54760 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHB4P54760 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.63■□□□□ 0.57
EPHB4P54760 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.63■□□□□ 0.57
EPHB4P54760 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHB4P54760 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
EPHB4P54760 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EPHB4P54760 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHB4P54760 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
EPHB4P54760 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EPHB4P54760 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.62■□□□□ 0.57
EPHB4P54760 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.62■□□□□ 0.57
EPHB4P54760 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHB4P54760 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.62■□□□□ 0.57
EPHB4P54760 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHB4P54760 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
EPHB4P54760 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EPHB4P54760 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHB4P54760 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EPHB4P54760 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHB4P54760 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHB4P54760 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EPHB4P54760 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.62■□□□□ 0.57
EPHB4P54760 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.62■□□□□ 0.57
EPHB4P54760 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.62■□□□□ 0.57
EPHB4P54760 AC241585.1-201ENST00000433527 519 ntBASIC18.62■□□□□ 0.57
EPHB4P54760 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.62■□□□□ 0.57
EPHB4P54760 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.62■□□□□ 0.57
EPHB4P54760 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.62■□□□□ 0.57
EPHB4P54760 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.62■□□□□ 0.57
EPHB4P54760 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.62■□□□□ 0.57
EPHB4P54760 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.62■□□□□ 0.57
EPHB4P54760 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.62■□□□□ 0.57
EPHB4P54760 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EPHB4P54760 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.62■□□□□ 0.57
EPHB4P54760 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHB4P54760 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.62■□□□□ 0.57
EPHB4P54760 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHB4P54760 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHB4P54760 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.62■□□□□ 0.57
EPHB4P54760 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHB4P54760 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EPHB4P54760 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
EPHB4P54760 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB4P54760 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB4P54760 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EPHB4P54760 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB4P54760 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB4P54760 PCDH8P1-201ENST00000428983 2773 ntBASIC18.61■□□□□ 0.57
EPHB4P54760 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EPHB4P54760 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.61■□□□□ 0.57
EPHB4P54760 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
EPHB4P54760 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.61■□□□□ 0.57
EPHB4P54760 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EPHB4P54760 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
EPHB4P54760 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
EPHB4P54760 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB4P54760 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
EPHB4P54760 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB4P54760 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB4P54760 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
EPHB4P54760 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB4P54760 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB4P54760 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
EPHB4P54760 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.61■□□□□ 0.57
EPHB4P54760 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB4P54760 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
EPHB4P54760 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB4P54760 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB4P54760 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.61■□□□□ 0.57
EPHB4P54760 TSSK5P-201ENST00000423978 907 ntBASIC18.61■□□□□ 0.57
EPHB4P54760 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB4P54760 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.61■□□□□ 0.57
EPHB4P54760 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.61■□□□□ 0.57
EPHB4P54760 ALG1L8P-201ENST00000533887 760 ntBASIC18.61■□□□□ 0.57
EPHB4P54760 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.61■□□□□ 0.57
EPHB4P54760 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.61■□□□□ 0.57
EPHB4P54760 AL161645.1-201ENST00000622716 1255 ntBASIC18.61■□□□□ 0.57
EPHB4P54760 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB4P54760 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.61■□□□□ 0.57
EPHB4P54760 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
EPHB4P54760 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
EPHB4P54760 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB4P54760 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms