Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMS1P54277 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.22■□□□□ 0.51
PMS1P54277 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMS1P54277 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.22■□□□□ 0.51
PMS1P54277 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.22■□□□□ 0.51
PMS1P54277 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMS1P54277 PKD1P1-201ENST00000458669 6805 ntBASIC18.22■□□□□ 0.51
PMS1P54277 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PMS1P54277 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMS1P54277 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMS1P54277 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PMS1P54277 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMS1P54277 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.22■□□□□ 0.51
PMS1P54277 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMS1P54277 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.22■□□□□ 0.51
PMS1P54277 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.22■□□□□ 0.51
PMS1P54277 AL513480.1-201ENST00000451731 511 ntBASIC18.22■□□□□ 0.51
PMS1P54277 POU5F1P6-201ENST00000466990 990 ntBASIC18.22■□□□□ 0.51
PMS1P54277 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.22■□□□□ 0.51
PMS1P54277 AC010507.1-201ENST00000633895 436 ntBASIC18.22■□□□□ 0.51
PMS1P54277 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMS1P54277 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMS1P54277 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.22■□□□□ 0.51
PMS1P54277 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PMS1P54277 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.22■□□□□ 0.51
PMS1P54277 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PMS1P54277 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMS1P54277 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
PMS1P54277 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.22■□□□□ 0.51
PMS1P54277 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMS1P54277 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMS1P54277 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMS1P54277 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PMS1P54277 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PMS1P54277 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.22■□□□□ 0.51
PMS1P54277 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMS1P54277 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.21■□□□□ 0.51
PMS1P54277 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.21■□□□□ 0.51
PMS1P54277 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PMS1P54277 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.21■□□□□ 0.51
PMS1P54277 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.21■□□□□ 0.51
PMS1P54277 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.21■□□□□ 0.51
PMS1P54277 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.21■□□□□ 0.51
PMS1P54277 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.21■□□□□ 0.51
PMS1P54277 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.21■□□□□ 0.51
PMS1P54277 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
PMS1P54277 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PMS1P54277 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMS1P54277 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PMS1P54277 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PMS1P54277 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PMS1P54277 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
PMS1P54277 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.2■□□□□ 0.5
PMS1P54277 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.2■□□□□ 0.5
PMS1P54277 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PMS1P54277 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.2■□□□□ 0.5
PMS1P54277 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.2■□□□□ 0.5
PMS1P54277 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.2■□□□□ 0.5
PMS1P54277 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.2■□□□□ 0.5
PMS1P54277 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
PMS1P54277 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.2■□□□□ 0.5
PMS1P54277 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.2■□□□□ 0.5
PMS1P54277 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.2■□□□□ 0.5
PMS1P54277 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.2■□□□□ 0.5
PMS1P54277 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.2■□□□□ 0.5
PMS1P54277 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.2■□□□□ 0.5
PMS1P54277 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.2■□□□□ 0.5
PMS1P54277 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms