Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK1P53667 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.31■□□□□ 0.2
LIMK1P53667 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.31■□□□□ 0.2
LIMK1P53667 HLA-H-201ENST00000383620 1096 ntBASIC16.31■□□□□ 0.2
LIMK1P53667 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK1P53667 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.31■□□□□ 0.2
LIMK1P53667 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.31■□□□□ 0.2
LIMK1P53667 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.31■□□□□ 0.2
LIMK1P53667 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LIMK1P53667 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.31■□□□□ 0.2
LIMK1P53667 AC091167.2-201ENST00000579581 588 ntBASIC16.31■□□□□ 0.2
LIMK1P53667 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.31■□□□□ 0.2
LIMK1P53667 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.31■□□□□ 0.2
LIMK1P53667 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.31■□□□□ 0.2
LIMK1P53667 AL512343.1-201ENST00000605837 169 ntBASIC16.31■□□□□ 0.2
LIMK1P53667 AC008494.3-201ENST00000606615 944 ntBASIC16.31■□□□□ 0.2
LIMK1P53667 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.31■□□□□ 0.2
LIMK1P53667 SPTSSB-204ENST00000617024 1292 ntBASIC16.31■□□□□ 0.2
LIMK1P53667 COX11-210ENST00000639671 696 ntBASIC16.31■□□□□ 0.2
LIMK1P53667 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK1P53667 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.31■□□□□ 0.2
LIMK1P53667 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK1P53667 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK1P53667 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK1P53667 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK1P53667 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK1P53667 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK1P53667 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LIMK1P53667 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.31■□□□□ 0.2
LIMK1P53667 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.31■□□□□ 0.2
LIMK1P53667 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.3■□□□□ 0.2
LIMK1P53667 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.3■□□□□ 0.2
LIMK1P53667 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 KRT18P55-202ENST00000578578 1546 ntBASIC16.3■□□□□ 0.2
LIMK1P53667 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.3■□□□□ 0.2
LIMK1P53667 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LIMK1P53667 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.3■□□□□ 0.2
LIMK1P53667 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LIMK1P53667 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LIMK1P53667 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LIMK1P53667 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 AC011270.2-201ENST00000624293 2550 ntBASIC16.3■□□□□ 0.2
LIMK1P53667 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.3■□□□□ 0.2
LIMK1P53667 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.3■□□□□ 0.2
LIMK1P53667 TTTY23B-201ENST00000442790 549 ntBASIC16.3■□□□□ 0.2
LIMK1P53667 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.3■□□□□ 0.2
LIMK1P53667 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.3■□□□□ 0.2
LIMK1P53667 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.3■□□□□ 0.2
LIMK1P53667 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.3■□□□□ 0.2
LIMK1P53667 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.3■□□□□ 0.2
LIMK1P53667 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.3■□□□□ 0.2
LIMK1P53667 AL589739.1-201ENST00000607720 493 ntBASIC16.3■□□□□ 0.2
LIMK1P53667 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
LIMK1P53667 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.3■□□□□ 0.2
LIMK1P53667 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.3■□□□□ 0.2
LIMK1P53667 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LIMK1P53667 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK1P53667 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
LIMK1P53667 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.3■□□□□ 0.2
LIMK1P53667 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LIMK1P53667 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.3■□□□□ 0.2
LIMK1P53667 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK1P53667 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK1P53667 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.29■□□□□ 0.2
LIMK1P53667 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK1P53667 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK1P53667 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.29■□□□□ 0.2
LIMK1P53667 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LIMK1P53667 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK1P53667 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK1P53667 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LIMK1P53667 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.29■□□□□ 0.2
LIMK1P53667 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LIMK1P53667 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LIMK1P53667 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK1P53667 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.29■□□□□ 0.2
LIMK1P53667 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.29■□□□□ 0.2
LIMK1P53667 RPL37AP1-201ENST00000412502 279 ntBASIC16.29■□□□□ 0.2
LIMK1P53667 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK1P53667 GNAQP1-201ENST00000444815 1067 ntBASIC16.29■□□□□ 0.2
LIMK1P53667 KRT223P-202ENST00000449164 1292 ntBASIC16.29■□□□□ 0.2
LIMK1P53667 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.29■□□□□ 0.2
LIMK1P53667 CHCHD2P3-201ENST00000603038 451 ntBASIC16.29■□□□□ 0.2
LIMK1P53667 AL139327.4-201ENST00000612362 153 ntBASIC16.29■□□□□ 0.2
LIMK1P53667 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms