Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.29■□□□□ 0.84
NUP98P52948 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NUP98P52948 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP98P52948 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NUP98P52948 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP98P52948 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP98P52948 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP98P52948 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.29■□□□□ 0.84
NUP98P52948 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP98P52948 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP98P52948 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.29■□□□□ 0.84
NUP98P52948 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.29■□□□□ 0.84
NUP98P52948 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NUP98P52948 MYCLP2-201ENST00000449268 967 ntBASIC20.29■□□□□ 0.84
NUP98P52948 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.29■□□□□ 0.84
NUP98P52948 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.29■□□□□ 0.84
NUP98P52948 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NUP98P52948 AC106886.1-201ENST00000568660 600 ntBASIC20.29■□□□□ 0.84
NUP98P52948 AL158212.4-201ENST00000624062 1286 ntBASIC20.29■□□□□ 0.84
NUP98P52948 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.29■□□□□ 0.84
NUP98P52948 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.29■□□□□ 0.84
NUP98P52948 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP98P52948 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.29■□□□□ 0.84
NUP98P52948 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NUP98P52948 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUP98P52948 LETM1P2-201ENST00000597330 2178 ntBASIC20.28■□□□□ 0.84
NUP98P52948 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUP98P52948 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.28■□□□□ 0.84
NUP98P52948 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
NUP98P52948 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUP98P52948 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.28■□□□□ 0.84
NUP98P52948 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.28■□□□□ 0.84
NUP98P52948 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC20.28■□□□□ 0.84
NUP98P52948 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUP98P52948 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.28■□□□□ 0.84
NUP98P52948 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.28■□□□□ 0.84
NUP98P52948 AC010319.3-201ENST00000597028 470 ntBASIC20.28■□□□□ 0.84
NUP98P52948 AC093726.1-201ENST00000608064 963 ntBASIC20.28■□□□□ 0.84
NUP98P52948 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NUP98P52948 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUP98P52948 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.28■□□□□ 0.84
NUP98P52948 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUP98P52948 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUP98P52948 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NUP98P52948 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUP98P52948 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.28■□□□□ 0.84
NUP98P52948 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NUP98P52948 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUP98P52948 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NUP98P52948 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
NUP98P52948 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.28■□□□□ 0.84
NUP98P52948 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NUP98P52948 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.27■□□□□ 0.84
NUP98P52948 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NUP98P52948 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.27■□□□□ 0.84
NUP98P52948 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.27■□□□□ 0.84
NUP98P52948 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.27■□□□□ 0.84
NUP98P52948 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUP98P52948 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NUP98P52948 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUP98P52948 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUP98P52948 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUP98P52948 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NUP98P52948 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUP98P52948 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUP98P52948 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUP98P52948 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUP98P52948 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NUP98P52948 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUP98P52948 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.27■□□□□ 0.84
NUP98P52948 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NUP98P52948 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.27■□□□□ 0.84
NUP98P52948 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC20.27■□□□□ 0.84
NUP98P52948 TARDBPP1-201ENST00000442013 1203 ntBASIC20.27■□□□□ 0.84
NUP98P52948 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.27■□□□□ 0.84
NUP98P52948 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.27■□□□□ 0.84
NUP98P52948 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NUP98P52948 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NUP98P52948 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP98P52948 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.26■□□□□ 0.83
NUP98P52948 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NUP98P52948 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NUP98P52948 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP98P52948 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP98P52948 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NUP98P52948 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP98P52948 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.26■□□□□ 0.83
NUP98P52948 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.26■□□□□ 0.83
NUP98P52948 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.26■□□□□ 0.83
NUP98P52948 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.26■□□□□ 0.83
NUP98P52948 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NUP98P52948 KRT8P37-201ENST00000451609 1420 ntBASIC20.26■□□□□ 0.83
NUP98P52948 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.26■□□□□ 0.83
NUP98P52948 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP98P52948 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NUP98P52948 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NUP98P52948 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP98P52948 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP98P52948 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP98P52948 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms