Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SSR4P51571 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR4P51571 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR4P51571 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SSR4P51571 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
SSR4P51571 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
SSR4P51571 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SSR4P51571 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.17■□□□□ 0.02
SSR4P51571 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SSR4P51571 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.17■□□□□ 0.02
SSR4P51571 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR4P51571 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR4P51571 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR4P51571 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR4P51571 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR4P51571 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.16■□□□□ 0.02
SSR4P51571 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR4P51571 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR4P51571 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR4P51571 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR4P51571 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR4P51571 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SSR4P51571 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR4P51571 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR4P51571 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR4P51571 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR4P51571 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.16■□□□□ 0.02
SSR4P51571 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR4P51571 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.16■□□□□ 0.02
SSR4P51571 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.16■□□□□ 0.02
SSR4P51571 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR4P51571 SPTSSB-204ENST00000617024 1292 ntBASIC15.16■□□□□ 0.02
SSR4P51571 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SSR4P51571 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR4P51571 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR4P51571 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR4P51571 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
SSR4P51571 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SSR4P51571 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
SSR4P51571 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR4P51571 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR4P51571 TUBB3P1-201ENST00000405796 1332 ntBASIC15.16■□□□□ 0.02
SSR4P51571 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR4P51571 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
SSR4P51571 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR4P51571 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR4P51571 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SSR4P51571 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SSR4P51571 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SSR4P51571 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SSR4P51571 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 GGT4P-201ENST00000623672 1708 ntBASIC15.15■□□□□ 0.02
SSR4P51571 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SSR4P51571 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SSR4P51571 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SSR4P51571 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 AC078925.2-201ENST00000624013 1973 ntBASIC15.15■□□□□ 0.02
SSR4P51571 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.15■□□□□ 0.02
SSR4P51571 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SSR4P51571 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 HLA-H-201ENST00000383620 1096 ntBASIC15.15■□□□□ 0.02
SSR4P51571 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.15■□□□□ 0.02
SSR4P51571 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.15■□□□□ 0.02
SSR4P51571 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.15■□□□□ 0.02
SSR4P51571 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.15■□□□□ 0.02
SSR4P51571 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SSR4P51571 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
SSR4P51571 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.15■□□□□ 0.02
SSR4P51571 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.15■□□□□ 0.02
SSR4P51571 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.15■□□□□ 0.02
SSR4P51571 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.15■□□□□ 0.02
SSR4P51571 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.15■□□□□ 0.02
SSR4P51571 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.15■□□□□ 0.02
SSR4P51571 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.15■□□□□ 0.02
SSR4P51571 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.15■□□□□ 0.02
SSR4P51571 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
SSR4P51571 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.15■□□□□ 0.02
SSR4P51571 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
SSR4P51571 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.15■□□□□ 0.02
SSR4P51571 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSR4P51571 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.15■□□□□ 0.02
SSR4P51571 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms