Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.7■□□□□ 0.42
SSR1P43307 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR1P43307 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
SSR1P43307 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR1P43307 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
SSR1P43307 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SSR1P43307 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR1P43307 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR1P43307 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSR1P43307 ELK2BP-201ENST00000415014 1224 ntBASIC17.7■□□□□ 0.42
SSR1P43307 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.7■□□□□ 0.42
SSR1P43307 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.7■□□□□ 0.42
SSR1P43307 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.7■□□□□ 0.42
SSR1P43307 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.7■□□□□ 0.42
SSR1P43307 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SSR1P43307 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.7■□□□□ 0.42
SSR1P43307 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SSR1P43307 AC025062.2-201ENST00000605477 670 ntBASIC17.7■□□□□ 0.42
SSR1P43307 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
SSR1P43307 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SSR1P43307 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SSR1P43307 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR1P43307 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR1P43307 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.7■□□□□ 0.42
SSR1P43307 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.7■□□□□ 0.42
SSR1P43307 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.7■□□□□ 0.42
SSR1P43307 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR1P43307 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR1P43307 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR1P43307 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.7■□□□□ 0.42
SSR1P43307 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SSR1P43307 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SSR1P43307 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR1P43307 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.7■□□□□ 0.42
SSR1P43307 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSR1P43307 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SSR1P43307 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SSR1P43307 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.7■□□□□ 0.42
SSR1P43307 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSR1P43307 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.69■□□□□ 0.42
SSR1P43307 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SSR1P43307 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SSR1P43307 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SSR1P43307 RPS2P1-201ENST00000434010 821 ntBASIC17.69■□□□□ 0.42
SSR1P43307 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.69■□□□□ 0.42
SSR1P43307 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SSR1P43307 AC073648.2-201ENST00000510116 352 ntBASIC17.69■□□□□ 0.42
SSR1P43307 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.69■□□□□ 0.42
SSR1P43307 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.69■□□□□ 0.42
SSR1P43307 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SSR1P43307 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.69■□□□□ 0.42
SSR1P43307 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.69■□□□□ 0.42
SSR1P43307 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.69■□□□□ 0.42
SSR1P43307 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 TSPY26P-202ENST00000565928 3884 ntBASIC17.69■□□□□ 0.42
SSR1P43307 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SSR1P43307 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SSR1P43307 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.69■□□□□ 0.42
SSR1P43307 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR1P43307 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SSR1P43307 LINC00895-201ENST00000629028 1637 ntBASIC17.69■□□□□ 0.42
SSR1P43307 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SSR1P43307 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
SSR1P43307 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.68■□□□□ 0.42
SSR1P43307 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.68■□□□□ 0.42
SSR1P43307 OR7E14P-202ENST00000530490 1290 ntBASIC17.68■□□□□ 0.42
SSR1P43307 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SSR1P43307 AC006557.2-201ENST00000592985 1240 ntBASIC17.68■□□□□ 0.42
SSR1P43307 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.68■□□□□ 0.42
SSR1P43307 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms